Applied Biosystems

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Software

  • autoseq - a small package of base calling software for ABI automated DNA sequencers
  • phrap - a program for assembling shotgun DNA sequence data
  • phred - Phred reads DNA sequencer trace data, calls bases, assigns quality values to the bases, and writes the base calls and quality values to output files.
  • Staden Package - This is a free to academics (charge for commercial users) package including sequence assemble, trace viewing/editing and sequence analysis tools. It also includes a GUI to the free EMBOSS suite.
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